BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032A04SP1|AL429497
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig141 1145 0.0
3x_Contig1591 117 4e-26
>3x_Contig141
Length = 808
Score = 1145 bits (577), Expect = 0.0
Identities = 581/583 (99%)
Strand = Plus / Plus
Query: 11 gaattagaccatggaaatgacatgatggctaggamgatgtattctgatagcaataatcct 70
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 226 gaataagaccatggaaatgacatgatggctaggacgatgtattctgatagcaataatcct 285
Query: 71 gtagtatgctgccatgaacaagtcttgtatttaatctgatgcccttcttcgtcactttct 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtagtatgctgccatgaacaagtcttgtatttaatctgatgcccttcttcgtcactttct 345
Query: 131 gtgaggccatccttgtaagacacgctagtatcgtcaccgtagttttggacttcaactacg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gtgaggccatccttgtaagacacgctagtatcgtcaccgtagttttggacttcaactacg 405
Query: 191 tcttccacatcttggtgtttttggccaggtgctttgagtagcgtcttatgcacatcgtaa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tcttccacatcttggtgtttttggccaggtgctttgagtagcgtcttatgcacatcgtaa 465
Query: 251 tcgtcagaaactgacccgttgtctgaaccctgaagtctgttctcaaaagacgtcattttt 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcgtcagaaactgacccgttgtctgaaccctgaagtctgttctcaaaagacgtcattttt 525
Query: 311 accggaaaaaaattgattatgtccttcaccctaacactgtaataagtagtgtttgaacgg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 accggaaaaaaattgattatgtccttcaccctaacactgtaataagtagtgtttgaacgg 585
Query: 371 gctcttattagatcctggaaagtcccagcttatatgtatggcagatctgagatggaaaag 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gctcttattagatcctggaaagtcccagcttatatgtatggcagatctgagatggaaaag 645
Query: 431 ataagttcagacaggatagttttattgcatataagtatgaaacgaacttggtaacaatgt 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ataagttcagacaggatagttttattgcatataagtatgaaacgaacttggtaacaatgt 705
Query: 491 caactattatataccggggtgaatatgagctgtgttttcacgattatccctttactggtc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 caactattatataccggggtgaatatgagctgtgttttcacgattatccctttactggtc 765
Query: 551 attaacgctactaatagttaatggtcagaaatgtaaacttgca 593
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 attaacgctactaatagttaatggtcagaaatgtaaacttgca 808
>3x_Contig1591
Length = 14045
Score = 117 bits (59), Expect = 4e-26
Identities = 109/126 (86%)
Strand = Plus / Plus
Query: 5 aatacngaattagaccatggaaatgacatgatggctaggamgatgtattctgatagcaat 64
||||| |||| |||||||| || ||||| ||||||| || |||||||||||||| || |
Sbjct: 4879 aatactgaataggaccatgggaaagacatcatggctaagatgatgtattctgataacatt 4938
Query: 65 aatcctgtagtatgctgccatgaacaagtcttgtatttaatctgatgcccttcttcgtca 124
| |||||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||
Sbjct: 4939 agacctgtaatatgctgccatgaactagtcttgtatttaatctgatgaccttcttcatcg 4998
Query: 125 ctttct 130
||||||
Sbjct: 4999 ctttct 5004
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5444
Number of Sequences: 1807
Number of extensions: 5444
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 2
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)